Jin Seok (Andy) Lee
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All (5)
bioinformatics (2)
long-read sequencing (2)
neoantigens (2)
programming (2)
python (2)
rust (3)
sequencing (3)
somatic variants (3)

Blog

Expanding the Unified Grammar for RNA Variants

bioinformatics
somatic variants
sequencing
long-read sequencing
neoantigens
rust
sequencing
A unified toolkit for identifying and integrating DNA and RNA variants. Part 2 of the Neoantigen Discovery with Long-read Sequencing series.
Oct 9, 2025

Inversion: Temporal Pincer in Cancer Genome

bioinformatics
somatic variants
sequencing
Head-to-head (5’ to 5’) and tail-to-tail (3’ to 3’) inversion breakpoints explained.
Jun 27, 2025

A Unifying Grammar for DNA Variants

neoantigens
somatic variants
long-read sequencing
A unified framework and toolkit for standardizing DNA variants at scale. Part 1 of the neoantigen discovery with long-read sequencing series.
Jun 23, 2025

Shaking the Rust Off Python Redox

rust
python
programming
An update on the tutotrial on how to seamlessly incorporate Rust code into a Python package.
Nov 23, 2023

Shaking the Rust Off Python

rust
python
programming
A tutotrial on how to seamlessly incorporate Rust code into a Python package.
Nov 18, 2023
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